List of Publications - Plasma-PEPSC

Index	Title	Authors	Download
1	Leveraging HPC Profiling & Tracing Tools to Understand the Performance of Particle-in-Cell Monte Carlo Simulations	Williams, J. J., Tskhakaya, D., Costea, S., Peng, I. B., Garcia-Gasulla, M., and Markidis, S.	PDF
2	Optimizing BIT1, a Particle-in-Cell Monte Carlo Code, with OpenMP/OpenACC and GPU Acceleration	Williams, J. J., Liu, F., Tskhakaya, D., Costea, S., Podolnik, A., and Markidis, S.	PDF
3	Enabling High-Throughput Parallel I/O in Particle-in-Cell Monte Carlo Simulations with openPMD and Darshan I/O Monitoring	Williams, J. J., Medeiros, D., Costea, S., Tskhakaya, D., Poeschel, F., Widera, R., Huebl, A., Klasky, S., Podhorszki, N., Kos, L., Podolnik, A., Hromadka, J., Narwal, T., Steiniger, K., Bussmann, M., Laure, E., and Markidis S.	PDF
4	Understanding the Impact of openPMD on BIT1, a Particle-in-Cell Monte Carlo Code, through Instrumentation, Monitoring, and In-Situ Analysis	Williams, J. J., Costea, S, Malony, A. D., Tskhakaya, S., Kos, L., Podolnik, A., Hromadka, J., Huck, K., Laure, E., Markidis, S.	PDF
5	Understanding Large-Scale Plasma Simulation Challenges for Fusion Energy on Supercomputers	Williams, J.J., Bhole, A., Kierans, D., Hoelzl, M., Holod, I., Tang, W., Tskhakaya, D., Costea, S., Kos, L., Podolnik, A. and Hromadka, J., Team, JOREK, Laure, E., and Markidis, S.	PDF
6	MPI Performance Analysis in Vlasiator: Unraveling Communication Bottlenecks	Faj, J., Williams, J.J., Peng, I.B., Ganse, U., Battarbee, M., Pfau-Kempf, Y., Kotipalo, L., Palmroth, M., and Markidis, S.	PDF
7	Integration of Modern HPC Performance Tools in Vlasiator for Exascale Analysis and Optimization	Coti, C., Pfau-Kempf, Y., Battarbee, M., Ganse, U., Shende, S., Huck, K., Rodriquez, J., Kotipalo, L., Faj, J., Williams, J.J., Peng, I., Malony, A. D., Markidis, S., and Palmroth M.	PDF
8	Characterizing the Performance of the GENE-X Code for Gyrokinetic Turbulence Simulations	Trilaksono, J., Williams, J. J., Ulbl, P., Dannert, T., Laure, E., Markidis, S., and Jenko, F.	PDF
9	Porting the grid-based 3D+ 3V hybrid-Vlasov kinetic plasma simulation Vlasiator to heterogeneous GPU architectures	Battarbee, M., Papadakis, K., Ganse, U., Hokkanen, J., Kotipalo, L., Pfau-Kempf, Y., Alho, M. and Palmroth, M.	PDF
10	Harnessing Integrated CPU-GPU System Memory for HPC: a first look into Grace Hopper	Schieffer, G., Wahlgren, J., Ren, J., Faj, J., and Peng, I.	PDF
11	On the Rise of AMD Matrix Cores: Performance, Power Efficiency, and Programmability	Schieffer, G., De Medeiros, D. A., Faj, J., Marathe, A., & Peng, I.	PDF
12	Understanding Data Movement in AMD Multi-GPU Systems with Infinity Fabric	Schieffer, G., Shi, R., Markidis, S., Herten, A., Faj, J., & Peng, I.	PDF
13	Integration of Modern HPC Performance Analysis in Vlasiator for Sustained Exascale	Coti, C., Malony, A. D., Shende, S., Huck, K., Rodriquez, J., Pfau-Kempf, Y., Battarbee, M., Ganse, U. and Palmroth, M.	PDF
14	Non-Blocking GPU-CPU Notifications to Enable More GPU-CPU Parallelism	Elis B., Pearce O., Boehme D., Burmark J., and Schulz M.	PDF
15	Quantum Computer Simulations at Warp Speed: Assessing the Impact of GPU Acceleration: A Case Study with IBM Qiskit Aer, Nvidia Thrust & cuQuantum	Faj J, Peng I, Wahlgren J, and Markidis S.	PDF
16	Programming Quantum Neural Networks on NISQ Systems: An Overview of Technologies and Methodologies	Markidis S.	PDF
17	Enabling Quantum Computer Simulations on AMD GPUs: a HIP Backend for Google’s qsim	Markidis S.	PDF
18	Dynamic Resource Management for In-Situ Techniques Using MPI-Sessions	Ju Y., Huber, D., Perez A., Ulbl P., Markidis S., Schlatter P., Schulz M., Schreiber M., and Laure E.	PDF
19	Hashinator: a portable hybrid hashmap designed for heterogeneous high performance computing	Papadakis, K., Battarbee, M., Ganse, U., Pfau-Kempf, Y., and Palmroth, M.	PDF
20	Streaming Data in HPC Workflows Using ADIOS	Eisenhauer, G., Podhorszki, N., Gainaru A., Klasky, S., Davis, P.E., Parashar, M., Wolf, M., Suchtya. E, Fredj, E., Bolea, V., Pöschel, F., Steiniger, K., Bussmann, M., Pausch, R, and Chandrasekaran, S.	PDF